Police arrested Tynel Cole around 8:30 pm Saturday in a tool shed on Holly Street following a six hour standoff.
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Officers were responding to a rape call at a home on Willow Street.
The Vallejo SWAT team responded and took over the scene.
They say when they first arrived, Cole ran into a home and wouldn't come out.
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A family inside the house was able to safely get out.
Some nearby houses were evacuated, and other neighbors were told to stay inside their homes.
The investigation is on-going and police ask that anybody with information about the case is encouraged to call Detective Long at (707) 648-4514.