At least 20 extra AC Transit buses will be deployed from the San Francisco Transbay Temporary Terminal for the evening commute. Those buses will be designated as "special" and travel directly to the MacArthur BART in Oakland where riders will disembark.
>> AC Transit website
The San Francisco Bay Ferry has enhanced service on the San Francisco/Oakland/Alameda and San Francisco-Alameda Harbor routes.
>> San Francisco Bay Ferry service information
The Vallejo Baylink Ferry has added an extra 2 p.m. Vallejo ferry departure and a 3 p.m. San Francisco ferry departure. There will be back-up buses at the San Francisco Ferry Building for the 3:30, 4:30 and 5:15 p.m. departures.
>> Vallejo Baylink Ferry website